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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
72
March, 2020
65
January, 2020
54
May, 2020
48
February, 2024
44
November, 2022
30
August, 2021
26
May, 2021
25
February, 2023
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
June, 2021
Available data
633
bed bed3+
259
bigWig
72
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
672
Homo sapiens
Biosample type
271
tissue
214
primary cell
163
cell line
69
in vitro differentiated cells
Organ
117
epithelium
78
brain
58
connective tissue
55
eye
49
pancreas
47
kidney
37
vasculature
30
blood vessel
29
heart
29
limb
25
musculature of body
23
liver
17
artery
13
adipose tissue
13
bone element
12
blood
12
bodily fluid
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
large intestine
6
extraembryonic component
6
lung
6
nerve
5
prostate gland
5
spinal cord
4
gonad
4
mammary gland
4
ureter
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
717
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
707
hg19
241
GRCh38
BIOSAMPLE
TYPE
717 results
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Clear Filters
accessible chromatin
Fine-mapped variants
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
coronary artery
3
3
+ See 107 more…
primary cell
monocyte
17
hepatocyte
7
osteoblast
5
endothelial cell
4
endothelial cell of hepatic sinusoid
4
+ See 120 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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