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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
960
histone modifications
944
chromatin state
883
accessible chromatin
816
binding sites
634
gene expression
167
differential activity
142
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
72
March, 2020
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
June, 2021
Available data
873
bed bed3+
508
bigWig
72
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
912
Homo sapiens
Biosample type
471
primary cell
264
tissue
163
cell line
59
in vitro differentiated cells
Organ
204
epithelium
94
connective tissue
78
brain
70
pancreas
59
eye
45
vasculature
35
blood vessel
35
heart
35
kidney
33
musculature of body
29
limb
27
liver
21
intestine
17
artery
15
bone element
15
lung
13
adipose tissue
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
nerve
5
gonad
5
prostate gland
5
spinal cord
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
687
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
947
hg19
447
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
957 results
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Clear Filters
accessible chromatin
Fine-mapped variants
primary cell
monocyte
18
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
12
+ See 206 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
2
coronary artery
3
3
right atrium auricular region
3
3
+ See 107 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 29 more…
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