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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1634
candidate regulatory elements
1334
target gene predictions
977
histone modifications
924
chromatin state
910
accessible chromatin
817
binding sites
683
gene expression
170
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
814
September, 2022
72
March, 2020
34
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
5
February, 2024
5
May, 2021
5
October, 2019
3
May, 2020
2
March, 2023
1
November, 2019
Available data
850
bed bed9
72
tsv
40
bigBed bed9
39
bed bed3+
34
bed bed9+
2
bigWig
1
bam
Organism
998
Homo sapiens
Biosample type
565
tissue
197
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
108
brain
80
musculature of body
77
kidney
71
lung
60
heart
59
intestine
59
limb
54
connective tissue
53
epithelium
42
vasculature
37
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
22
pancreas
20
liver
small intestine
16
adipose tissue
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
14
artery
13
prostate gland
13
ureter
11
spinal cord
11
thymus
10
penis
9
eye
8
gonad
8
lymph node
7
esophagus
7
nerve
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
998
AMP
Genome assembly (visualization)
996
hg19
922
GRCh38
organ_slims!
small intestine
BIOSAMPLE
TYPE
998 results
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chromatin state
Fine-mapped variants
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 115 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 83 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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