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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1183
target gene predictions
977
histone modifications
939
chromatin state
864
accessible chromatin
811
binding sites
579
gene expression
162
differential activity
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
860
bed bed3+
502
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
819
Homo sapiens
Biosample type
453
primary cell
184
tissue
163
cell line
64
in vitro differentiated cells
Organ
186
epithelium
82
connective tissue
58
eye
50
kidney
50
pancreas
42
brain
32
vasculature
26
heart
22
blood vessel
22
musculature of body
21
intestine
20
limb
15
bone element
15
liver
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
595
AMP
222
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
860
hg19
370
GRCh38
BIOSAMPLE
TYPE
864 results
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accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
12
+ See 212 more…
tissue
retina
23
pigmented layer of retina
19
kidney
10
islet of Langerhans
6
heart
5
+ See 85 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 28 more…
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