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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
pQTL
1
representative DNase hypersensitivity sites
Date released
729
February, 2021
289
June, 2020
222
November, 2021
91
October, 2022
65
January, 2020
55
February, 2024
54
May, 2020
44
November, 2022
31
August, 2021
31
May, 2021
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1723
bed bed3+
528
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1690
Homo sapiens
Biosample type
806
cell line
589
primary cell
233
tissue
107
in vitro differentiated cells
Organ
255
epithelium
119
connective tissue
70
pancreas
65
eye
58
bodily fluid
58
brain
57
blood
57
kidney
57
vasculature
42
blood vessel
37
liver
34
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
19
mammary gland
17
artery
16
large intestine
13
prostate gland
12
extraembryonic component
10
penis
9
adipose tissue
8
gonad
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
6
lymphatic vessel
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1465
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1726
hg19
398
GRCh38
1
hg18
annotation_type!
pQTL
BIOSAMPLE
TYPE
1735 results
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Clear Filters
accessible chromatin
binding sites
hQTL
cell line
EndoC_BH1
8
1
breast cancer cell
9
fibroblast cell line
1
6
melanoma
7
HepG2
2
3
+ See 541 more…
primary cell
monocyte
18
1
2
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 247 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
islet of Langerhans
6
2
heart
5
1
+ See 111 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
retinal pigment epithelial cell
6
SGBS preadipocytes
5
adipocyte
4
1
+ See 51 more…
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