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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1577
candidate regulatory elements
1308
target gene predictions
975
histone modifications
894
chromatin state
893
accessible chromatin
815
binding sites
678
gene expression
167
differential activity
164
eQTL
132
variant allelic effects
65
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
222
November, 2021
63
March, 2020
59
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
10
November, 2019
9
October, 2019
6
September, 2022
5
February, 2021
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
June, 2021
Available data
883
bed bed3+
514
bigWig
63
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
913
Homo sapiens
Biosample type
484
primary cell
243
tissue
162
cell line
69
in vitro differentiated cells
Organ
212
epithelium
94
connective tissue
78
brain
70
pancreas
59
eye
50
kidney
45
vasculature
35
blood vessel
35
heart
33
musculature of body
limb
27
liver
21
intestine
17
artery
15
bone element
15
lung
13
adipose tissue
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
nerve
5
gonad
5
prostate gland
5
spinal cord
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
688
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
948
hg19
441
GRCh38
organ_slims!
limb
BIOSAMPLE
TYPE
958 results
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Clear Filters
accessible chromatin
Fine-mapped variants
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 217 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
coronary artery
3
3
+ See 92 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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