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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1499
candidate regulatory elements
1232
target gene predictions
951
histone modifications
847
chromatin state
806
accessible chromatin
785
binding sites
629
gene expression
153
differential activity
145
eQTL
116
variant allelic effects
59
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
264
June, 2020
190
November, 2021
57
March, 2020
54
May, 2020
50
January, 2020
43
February, 2024
37
November, 2022
30
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
16
April, 2020
11
May, 2022
10
November, 2019
8
October, 2019
6
September, 2022
4
February, 2021
4
January, 2022
2
March, 2023
1
September, 2018
Available data
796
bed bed3+
459
bigWig
57
tsv
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
820
Homo sapiens
Biosample type
422
primary cell
229
tissue
157
cell line
57
in vitro differentiated cells
Organ
212
epithelium
connective tissue
78
brain
70
pancreas
59
eye
50
kidney
45
vasculature
35
blood vessel
35
heart
33
musculature of body
limb
27
liver
21
intestine
17
artery
15
bone element
15
lung
13
adipose tissue
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
nerve
5
gonad
5
prostate gland
5
spinal cord
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
631
AMP
190
ENCODE
28
T1D
16
LungMap
Genome assembly (visualization)
855
hg19
387
GRCh38
organ_slims!
limb
connective tissue
BIOSAMPLE
TYPE
865 results
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Clear Filters
accessible chromatin
Fine-mapped variants
primary cell
monocyte
18
endothelial cell
15
excitatory neuron
12
macrophage
12
smooth muscle cell
9
+ See 194 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
coronary artery
3
3
+ See 88 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
4
B cell
2
+ See 26 more…
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