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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1653
candidate regulatory elements
1348
target gene predictions
973
histone modifications
935
chromatin state
854
accessible chromatin
811
binding sites
682
gene expression
170
eQTL
167
differential activity
138
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
725
February, 2021
283
June, 2020
218
November, 2021
89
October, 2022
63
January, 2020
54
February, 2024
54
May, 2020
31
August, 2021
28
January, 2021
26
May, 2021
22
November, 2022
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
February, 2023
1
June, 2021
1
March, 2020
Available data
1655
bed bed3+
492
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1620
Homo sapiens
Biosample type
801
cell line
575
primary cell
188
tissue
101
in vitro differentiated cells
Organ
255
epithelium
119
connective tissue
70
pancreas
eye
58
bodily fluid
58
brain
57
blood
57
kidney
57
vasculature
42
blood vessel
37
liver
34
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
19
mammary gland
17
artery
16
large intestine
13
prostate gland
12
extraembryonic component
10
penis
9
adipose tissue
8
gonad
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
6
lymphatic vessel
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1399
AMP
218
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1656
hg19
392
GRCh38
1
hg18
organ_slims!
eye
BIOSAMPLE
TYPE
1665 results
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Clear Filters
accessible chromatin
binding sites
cell line
EndoC_BH1
8
1
breast cancer cell
9
fibroblast cell line
1
6
melanoma
7
HepG2
2
3
+ See 538 more…
primary cell
monocyte
18
1
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 242 more…
tissue
kidney
10
1
islet of Langerhans
6
2
heart
5
1
pancreas
5
1
liver
4
1
+ See 108 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
SGBS preadipocytes
5
adipocyte
4
1
chondrocyte
5
+ See 50 more…
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