Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1667
candidate regulatory elements
1354
target gene predictions
976
histone modifications
942
chromatin state
909
accessible chromatin
815
binding sites
680
gene expression
171
eQTL
165
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
727
February, 2021
288
June, 2020
220
November, 2021
91
October, 2022
65
January, 2020
55
February, 2024
54
May, 2020
44
November, 2022
31
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
18
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1714
bed bed3+
525
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1679
Homo sapiens
Biosample type
805
cell line
581
primary cell
233
tissue
105
in vitro differentiated cells
Organ
255
epithelium
119
connective tissue
70
pancreas
65
eye
58
bodily fluid
58
brain
57
blood
57
kidney
57
vasculature
42
blood vessel
37
liver
34
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
19
mammary gland
17
artery
16
large intestine
13
prostate gland
12
extraembryonic component
10
penis
9
adipose tissue
8
gonad
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
lymphatic vessel
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1457
AMP
220
ENCODE
29
T1D
18
LungMap
Genome assembly (visualization)
1715
hg19
396
GRCh38
1
hg18
organ_slims!
lymphatic vessel
BIOSAMPLE
TYPE
1724 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
binding sites
cell line
EndoC_BH1
8
1
breast cancer cell
9
fibroblast cell line
1
6
melanoma
7
HepG2
2
3
+ See 540 more…
primary cell
monocyte
18
1
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 245 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
islet of Langerhans
6
2
heart
5
1
+ See 111 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
retinal pigment epithelial cell
6
SGBS preadipocytes
5
adipocyte
4
1
+ See 50 more…
See all biosamples
Download