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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
910
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
105
January, 2022
65
January, 2020
57
August, 2021
56
February, 2024
54
May, 2020
44
November, 2022
30
February, 2023
29
May, 2021
28
January, 2021
26
February, 2020
19
April, 2020
15
May, 2022
14
February, 2021
12
November, 2019
9
October, 2019
7
October, 2022
3
September, 2018
3
September, 2022
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2023
Available data
926
bed bed3+
528
bigWig
27
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
xls
Organism
1048
Homo sapiens
Biosample type
538
primary cell
314
tissue
173
cell line
69
in vitro differentiated cells
Organ
214
epithelium
111
connective tissue
77
pancreas
71
brain
60
eye
54
kidney
45
vasculature
36
musculature of body
35
blood vessel
34
heart
33
liver
25
limb
24
intestine
20
adipose tissue
18
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
817
AMP
222
ENCODE
31
T1D
19
LungMap
3
ITG
2
community
Genome assembly (visualization)
971
hg19
525
GRCh38
3
hg18
files.file_type!
xls
BIOSAMPLE
TYPE
1094 results
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table-tab-icon
Clear Filters
accessible chromatin
eQTL
caQTL
primary cell
monocyte
18
4
macrophage
12
7
1
endothelial cell
15
1
2
fibroblast
16
2
excitatory neuron
12
+ See 228 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
liver
4
7
1
kidney
10
1
+ See 128 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 150 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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