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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1602
candidate regulatory elements
1313
target gene predictions
972
histone modifications
908
chromatin state
903
accessible chromatin
811
binding sites
681
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
807
September, 2022
327
November, 2021
282
June, 2020
221
February, 2024
160
May, 2021
72
May, 2020
66
January, 2020
56
January, 2021
44
November, 2022
43
March, 2020
30
August, 2021
30
February, 2023
19
April, 2020
15
May, 2022
13
February, 2021
12
November, 2019
9
October, 2019
7
October, 2022
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
June, 2021
Available data
2219
bed bed3+
528
bigWig
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2184
Homo sapiens
Biosample type
861
primary cell
681
tissue
550
cell line
134
in vitro differentiated cells
3
stem cell
Organ
336
epithelium
168
connective tissue
125
kidney
118
brain
109
musculature of body
109
pancreas
96
embryo
94
intestine
93
lung
77
heart
70
vasculature
69
bodily fluid
69
limb
68
eye
67
blood
61
uterus
57
skin of body
54
blood vessel
large intestine
46
liver
45
extraembryonic component
38
stomach
31
bone element
28
adrenal gland
26
mammary gland
26
small intestine
21
artery
21
placenta
20
adipose tissue
20
prostate gland
17
lymph node
17
ureter
16
gonad
16
thymus
14
esophagus
14
penis
11
skeleton
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
8
lymphoid tissue
8
thyroid gland
7
lymphatic vessel
6
bronchus
6
nerve
6
testis
6
vein
5
bone marrow
5
mouth
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
1
trachea
Project
1824
AMP
327
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
2214
hg19
676
GRCh38
organ_slims!
large intestine
BIOSAMPLE
TYPE
2229 results
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Clear Filters
target gene predictions
accessible chromatin
caQTL
primary cell
endothelial cell
7
15
2
fibroblast
4
16
monocyte
2
18
pericyte cell
10
10
CD14-positive monocyte
19
+ See 260 more…
tissue
retina
3
23
heart
20
5
kidney
14
10
stomach
21
3
pigmented layer of retina
20
+ See 132 more…
cell line
HeLa-S3
55
H1-hESC
39
1
K562
23
1
A549
19
1
HFFc6
19
+ See 237 more…
in vitro differentiated cells
neural progenitor cell
5
10
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
4
embryonic stem cell
1
6
dendritic cell
6
+ See 52 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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