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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1574
candidate regulatory elements
1294
target gene predictions
967
histone modifications
896
accessible chromatin
893
chromatin state
799
binding sites
681
gene expression
169
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
216
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
30
February, 2023
28
January, 2021
26
May, 2021
19
April, 2020
15
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
7
October, 2022
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
899
bed bed3+
522
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
864
Homo sapiens
Biosample type
487
primary cell
196
tissue
158
cell line
68
in vitro differentiated cells
Organ
214
epithelium
90
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
39
vasculature
29
blood vessel
29
musculature of body
28
heart
25
liver
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
643
AMP
216
ENCODE
31
T1D
19
LungMap
Genome assembly (visualization)
894
hg19
393
GRCh38
organ_slims!
large intestine
mammary gland
BIOSAMPLE
TYPE
909 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
18
endothelial cell
15
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 214 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 92 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
See all biosamples
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