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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1491
candidate regulatory elements
1273
target gene predictions
967
histone modifications
859
chromatin state
855
accessible chromatin
798
binding sites
481
gene expression
167
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
266
June, 2020
219
November, 2021
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
30
February, 2023
28
January, 2021
26
May, 2021
19
April, 2020
15
August, 2021
15
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
7
October, 2022
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
859
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
823
Homo sapiens
Biosample type
472
primary cell
178
tissue
150
cell line
68
in vitro differentiated cells
Organ
214
epithelium
90
connective tissue
65
pancreas
59
eye
kidney
42
brain
39
vasculature
29
blood vessel
29
musculature of body
28
heart
25
liver
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
599
AMP
219
ENCODE
31
T1D
19
LungMap
Genome assembly (visualization)
854
hg19
372
GRCh38
organ_slims!
lymph node
kidney
BIOSAMPLE
TYPE
868 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
18
endothelial cell
15
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 201 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
liver
4
1
+ See 84 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 135 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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