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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1600
candidate regulatory elements
1317
target gene predictions
965
histone modifications
903
chromatin state
869
accessible chromatin
784
binding sites
647
gene expression
165
eQTL
149
differential activity
125
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
275
June, 2020
217
November, 2021
55
January, 2020
53
May, 2020
45
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
16
April, 2020
15
May, 2022
10
February, 2021
9
November, 2019
9
October, 2019
7
October, 2022
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
869
bed bed3+
502
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
834
Homo sapiens
Biosample type
468
primary cell
190
tissue
153
cell line
68
in vitro differentiated cells
Organ
214
epithelium
90
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
vasculature
29
blood vessel
29
musculature of body
28
heart
25
liver
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
615
AMP
217
ENCODE
31
T1D
16
LungMap
Genome assembly (visualization)
867
hg19
371
GRCh38
organ_slims!
lymph node
vasculature
BIOSAMPLE
TYPE
879 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
18
endothelial cell
15
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 204 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 138 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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