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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
971
histone modifications
867
chromatin state
863
accessible chromatin
810
binding sites
481
gene expression
167
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
274
June, 2020
219
November, 2021
54
February, 2024
54
September, 2023
51
January, 2020
51
March, 2023
51
May, 2020
44
November, 2022
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
15
August, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
854
bed bed3+
493
bigWig
102
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
929
Homo sapiens
Biosample type
557
primary cell
181
tissue
168
cell line
68
in vitro differentiated cells
Organ
304
epithelium
kidney
102
connective tissue
98
pancreas
59
eye
54
vasculature
42
brain
38
blood vessel
28
liver
28
musculature of body
26
heart
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
adipose tissue
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
lymphatic vessel
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
644
AMP
219
ENCODE
54
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
856
hg19
365
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
974 results
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Clear Filters
accessible chromatin
differential activity
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 233 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
liver
4
1
+ See 87 more…
cell line
EndoC_BH1
8
3
induced pluripotent stem cell
7
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 144 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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