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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
110
September, 2023
105
January, 2022
65
January, 2020
61
February, 2024
57
August, 2021
54
May, 2020
52
March, 2023
44
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
26
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
913
bed bed3+
528
bigWig
183
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1203
Homo sapiens
Biosample type
680
primary cell
317
tissue
183
cell line
69
in vitro differentiated cells
Organ
307
epithelium
121
connective tissue
113
pancreas
110
kidney
71
brain
60
eye
60
vasculature
44
blood vessel
36
liver
35
musculature of body
32
heart
25
limb
24
intestine
22
adipose tissue
18
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
lymphatic vessel
6
prostate gland
5
nerve
5
placenta
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
857
AMP
222
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
3
ITG
Genome assembly (visualization)
968
hg19
518
GRCh38
3
hg18
BIOSAMPLE
TYPE
1249 results
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Clear Filters
accessible chromatin
eQTL
differential activity
primary cell
monocyte
18
4
macrophage
12
7
fibroblast
16
2
endothelial cell
15
1
excitatory neuron
12
+ See 287 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
liver
4
7
1
kidney
10
1
+ See 130 more…
cell line
EndoC_BH1
8
3
induced pluripotent stem cell
7
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
+ See 151 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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