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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1246
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
691
accessible chromatin
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
105
January, 2022
65
January, 2020
57
August, 2021
56
February, 2024
54
May, 2020
44
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
25
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2023
Available data
691
bed bed3+
306
bigWig
25
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
814
Homo sapiens
Biosample type
312
tissue
306
primary cell
173
cell line
69
in vitro differentiated cells
Organ
137
epithelium
75
connective tissue
71
brain
69
pancreas
56
eye
51
kidney
37
vasculature
29
blood vessel
28
liver
26
heart
26
musculature of body
25
limb
20
adipose tissue
16
artery
14
blood
14
bodily fluid
14
bone element
13
intestine
11
skin of body
10
embryo
10
lung
9
large intestine
8
lymph node
8
skeleton
7
extraembryonic component
7
gonad
6
prostate gland
5
esophagus
5
nerve
4
mammary gland
4
spinal cord
4
stomach
4
testis
4
ureter
3
penis
3
placenta
3
spleen
3
uterus
2
adrenal gland
2
breast
2
bronchus
2
lymphatic vessel
2
lymphoid tissue
2
mouth
2
ovary
2
small intestine
2
thyroid gland
2
vein
1
bone marrow
1
nose
1
pituitary gland
1
thymus
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
809
AMP
ENCODE
29
T1D
19
LungMap
3
ITG
Genome assembly (visualization)
746
hg19
296
GRCh38
3
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
860 results
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Clear Filters
accessible chromatin
eQTL
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
4
7
+ See 128 more…
primary cell
monocyte
18
4
macrophage
3
7
hepatocyte
7
regulatory T cell
5
2
endothelial cell
5
1
+ See 151 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 150 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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