Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
202
gene expression
159
candidate regulatory elements
77
chromatin state
75
target gene predictions
56
differential activity
50
accessible chromatin
16
variant allelic effects
7
binding sites
6
histone modifications
4
eQTL
Date released
15
August, 2021
15
June, 2020
14
January, 2020
6
February, 2021
3
May, 2020
3
November, 2021
Available data
55
bed bed3+
35
bigWig
Organism
56
Homo sapiens
Biosample type
25
tissue
23
primary cell
7
cell line
1
in vitro differentiated cells
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
53
AMP
3
ENCODE
Genome assembly (visualization)
55
hg19
27
GRCh38
BIOSAMPLE
TYPE
56 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
histone modifications
tissue
kidney
10
2
cortex of kidney
1
1
renal pelvis
2
glomerular epithelium
1
kidney epithelium
1
+ See 7 more…
primary cell
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
2
+ See 13 more…
cell line
HEK293
1
1
ACHN
1
Caki2
1
RCC 7860
1
glomerular visceral epithelial cell
1
+ See 1 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
Download