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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
971
histone modifications
867
chromatin state
863
accessible chromatin
810
binding sites
481
gene expression
167
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
274
June, 2020
219
November, 2021
123
February, 2024
116
May, 2021
96
February, 2021
87
September, 2023
68
January, 2020
52
August, 2021
51
May, 2020
44
November, 2022
30
February, 2020
28
January, 2021
28
March, 2024
25
February, 2023
19
April, 2020
14
May, 2022
13
March, 2023
12
November, 2019
9
August, 2018
9
October, 2019
8
March, 2020
6
September, 2022
4
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
July, 2020
1
June, 2021
Available data
854
bed bed3+
502
bigWig
446
tsv
24
csv
21
txt
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1300
Homo sapiens
Biosample type
750
primary cell
276
tissue
176
cell line
143
in vitro differentiated cells
Organ
465
epithelium
kidney
137
connective tissue
113
pancreas
72
vasculature
61
brain
60
eye
51
blood vessel
48
liver
47
heart
38
musculature of body
25
limb
24
intestine
22
embryo
20
adipose tissue
19
artery
19
bone element
16
lung
15
skin of body
13
blood
13
bodily fluid
12
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
skeleton
7
gonad
7
lymphatic vessel
7
mammary gland
6
esophagus
6
prostate gland
5
nerve
5
uterus
4
placenta
4
ureter
3
bronchus
3
lymphoid tissue
3
ovary
3
penis
3
small intestine
3
spinal cord
3
spleen
3
testis
3
thyroid gland
3
vein
2
bone marrow
2
breast
2
mouth
2
thymus
2
tongue
2
urinary bladder
1
nose
1
pericardium
1
pituitary gland
1
trachea
1
vagina
Project
991
AMP
219
ENCODE
87
KPMP
29
T1D
19
LungMap
Genome assembly (visualization)
868
hg19
374
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
1345 results
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Clear Filters
accessible chromatin
gene expression
representative DNase hypersensitivity sites
primary cell
monocyte
18
15
endothelial cell
15
9
hepatocyte
8
13
fibroblast
16
macrophage
12
2
+ See 269 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
11
heart
5
3
subcutaneous adipose tissue
2
5
+ See 128 more…
cell line
EndoC_BH1
8
8
H1-hESC
1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 144 more…
in vitro differentiated cells
neural progenitor cell
10
7
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
+ See 48 more…
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