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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
944
chromatin state
905
accessible chromatin
816
binding sites
124
variant allelic effects
72
Fine-mapped variants
63
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
851
February, 2021
288
June, 2020
222
November, 2021
140
May, 2021
65
January, 2020
54
May, 2020
46
August, 2021
45
February, 2024
41
November, 2022
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1879
bed bed3+
528
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1836
Homo sapiens
Biosample type
747
cell line
693
primary cell
286
tissue
155
in vitro differentiated cells
Organ
239
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
55
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1611
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1881
hg19
497
GRCh38
BIOSAMPLE
TYPE
1881 results
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Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 518 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
fibroblast
16
excitatory neuron
12
+ See 260 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
heart
1
5
+ See 153 more…
in vitro differentiated cells
neural progenitor cell
14
10
embryonic stem cell
1
5
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 72 more…
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