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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1246
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
691
accessible chromatin
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
72
March, 2020
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
June, 2021
Available data
681
bed bed3+
306
bigWig
72
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
720
Homo sapiens
Biosample type
271
tissue
262
primary cell
163
cell line
69
in vitro differentiated cells
Organ
134
epithelium
78
brain
62
connective tissue
59
pancreas
55
eye
47
kidney
40
vasculature
32
blood vessel
29
heart
29
limb
25
musculature of body
23
liver
17
artery
14
bone element
13
adipose tissue
12
blood
12
bodily fluid
10
embryo
10
intestine
9
lung
8
lymph node
8
skeleton
8
skin of body
7
large intestine
6
extraembryonic component
6
nerve
5
prostate gland
5
spinal cord
4
gonad
4
mammary gland
4
ureter
3
penis
3
stomach
2
bronchus
2
esophagus
2
lymphatic vessel
2
lymphoid tissue
2
placenta
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
bone marrow
1
breast
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
717
AMP
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
755
hg19
242
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
765 results
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Clear Filters
accessible chromatin
Fine-mapped variants
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
coronary artery
3
3
+ See 107 more…
primary cell
monocyte
18
hepatocyte
7
pancreatic beta cell
6
endothelial cell
5
osteoblast
5
+ See 142 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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