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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1507
candidate regulatory elements
1152
target gene predictions
969
histone modifications
843
chromatin state
810
binding sites
657
gene expression
651
accessible chromatin
167
differential activity
160
eQTL
122
variant allelic effects
56
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
54
May, 2020
50
January, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
19
April, 2020
14
May, 2022
8
October, 2019
7
November, 2019
6
September, 2022
4
February, 2021
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
641
bed bed3+
277
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
606
Homo sapiens
Biosample type
262
primary cell
161
tissue
159
cell line
69
in vitro differentiated cells
Organ
134
epithelium
56
connective tissue
55
eye
54
pancreas
47
kidney
42
brain
31
vasculature
23
blood vessel
heart
limb
20
liver
19
musculature of body
14
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
9
lung
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
bronchus
2
esophagus
2
lymphatic vessel
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
bone marrow
1
breast
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
603
AMP
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
643
hg19
141
GRCh38
award.project!
ENCODE
organ_slims!
limb
heart
BIOSAMPLE
TYPE
651 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
hepatocyte
7
pancreatic beta cell
6
endothelial cell
5
osteoblast
5
+ See 142 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
pancreas
5
+ See 74 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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