Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
848
February, 2021
838
September, 2022
289
June, 2020
65
January, 2020
54
May, 2020
50
February, 2024
44
November, 2022
30
August, 2021
26
May, 2021
25
February, 2023
14
May, 2022
12
November, 2019
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
2304
bed bed3+
259
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2269
Homo sapiens
Biosample type
1134
tissue
542
primary cell
490
cell line
148
in vitro differentiated cells
Organ
217
epithelium
206
kidney
165
musculature of body
153
brain
137
lung
132
connective tissue
123
intestine
114
limb
90
heart
83
skin of body
78
vasculature
76
large intestine
73
eye
68
pancreas
67
embryo
65
extraembryonic component
60
blood vessel
59
bodily fluid
55
blood
54
stomach
43
liver
38
bone element
38
small intestine
35
ureter
32
mammary gland
32
prostate gland
31
penis
31
placenta
29
adrenal gland
29
lymph node
26
adipose tissue
21
artery
21
gonad
21
thymus
19
esophagus
18
spinal cord
17
spleen
12
skeleton
11
lymphoid tissue
11
testis
11
uterus
9
mouth
9
nerve
9
ovary
9
thyroid gland
8
vein
6
breast
5
bronchus
5
lymphatic vessel
5
tongue
4
urinary bladder
4
vagina
2
bone marrow
2
nose
1
trachea
Project
2314
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
2306
hg19
169
GRCh38
BIOSAMPLE
TYPE
2314 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
tissue
stomach
40
3
heart
37
5
kidney
29
10
muscle of arm
33
1
lung
33
+ See 142 more…
primary cell
common myeloid progenitor, CD34-positive
27
monocyte
17
B cell
14
2
CD4-positive, alpha-beta memory T cell
14
foreskin keratinocyte
11
+ See 167 more…
cell line
A549
21
1
MCF-7
9
1
EndoC_BH1
8
K562
7
1
H9
7
+ See 253 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
neural progenitor cell
5
10
adipocyte
4
4
embryonic stem cell
6
retinal pigment epithelial cell
6
+ See 49 more…
See all biosamples
Download