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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1632
candidate regulatory elements
1193
target gene predictions
971
histone modifications
916
chromatin state
801
binding sites
622
accessible chromatin
499
gene expression
160
eQTL
130
variant allelic effects
65
Fine-mapped variants
44
differential activity
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
285
June, 2020
60
January, 2020
53
May, 2020
44
February, 2024
44
November, 2022
30
August, 2021
26
May, 2021
24
February, 2023
14
May, 2022
10
February, 2021
9
November, 2019
9
October, 2019
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
612
bed bed3+
246
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
577
Homo sapiens
Biosample type
202
primary cell
189
tissue
162
cell line
69
in vitro differentiated cells
Organ
117
epithelium
55
eye
52
connective tissue
47
kidney
44
pancreas
42
brain
28
vasculature
blood vessel
20
heart
20
limb
20
liver
19
musculature of body
13
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
622
AMP
219
ENCODE
29
T1D
17
LungMap
Genome assembly (visualization)
614
hg19
154
GRCh38
organ_slims!
blood vessel
BIOSAMPLE
TYPE
622 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
hepatocyte
7
osteoblast
5
endothelial cell
4
glutamatergic neuron
4
+ See 113 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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