Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1343
candidate regulatory elements
985
target gene predictions
753
histone modifications
747
chromatin state
716
binding sites
412
accessible chromatin
181
gene expression
99
eQTL
74
Fine-mapped variants
59
variant allelic effects
15
differential activity
4
variant to gene
2
caQTL
2
other
1
representative DNase hypersensitivity sites
1
sQTL
Date released
236
June, 2020
44
January, 2020
35
November, 2022
25
February, 2023
18
February, 2024
August, 2021
13
May, 2021
12
November, 2019
10
February, 2021
7
May, 2020
4
October, 2019
3
January, 2022
3
September, 2018
1
May, 2022
1
September, 2022
Available data
405
bed bed3+
127
bigWig
Organism
412
Homo sapiens
Biosample type
primary cell
190
tissue
163
cell line
59
in vitro differentiated cells
Organ
53
epithelium
52
eye
33
brain
28
pancreas
26
connective tissue
20
heart
20
kidney
20
limb
13
bone element
11
blood
11
bodily fluid
11
vasculature
10
intestine
10
musculature of body
9
blood vessel
8
embryo
8
lymph node
8
skeleton
7
adipose tissue
7
artery
7
large intestine
7
liver
6
lung
6
skin of body
5
prostate gland
4
ureter
3
extraembryonic component
3
gonad
3
nerve
3
stomach
2
esophagus
2
lymphoid tissue
2
mammary gland
2
penis
2
spinal cord
2
spleen
2
testis
1
adrenal gland
1
breast
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
placenta
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
urinary bladder
1
uterus
Project
412
AMP
Genome assembly (visualization)
405
hg19
93
GRCh38
month_released!
August, 2021
biosample_type!
primary cell
BIOSAMPLE
TYPE
412 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
pancreas
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 29 more…
See all biosamples
Download