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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1155
target gene predictions
977
histone modifications
939
chromatin state
836
accessible chromatin
811
binding sites
609
gene expression
164
eQTL
162
differential activity
84
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
133
May, 2020
February, 2024
65
January, 2020
44
November, 2022
30
August, 2021
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
February, 2021
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
October, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
900
bed bed3+
475
bigWig
3
bam
3
bed gappedPeak
3
xls
2
bigBed narrowPeak
Organism
874
Homo sapiens
Biosample type
450
primary cell
232
tissue
167
cell line
70
in vitro differentiated cells
Organ
191
epithelium
90
connective tissue
66
kidney
60
eye
59
brain
45
pancreas
45
vasculature
36
heart
31
blood vessel
28
limb
27
musculature of body
21
intestine
18
liver
15
artery
15
lung
14
bone element
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
7
ureter
5
gonad
5
nerve
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
3
bronchus
3
penis
3
small intestine
3
uterus
3
vein
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
1
bone marrow
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
678
AMP
222
ENCODE
19
LungMap
1
T1D
Genome assembly (visualization)
900
hg19
370
GRCh38
month_released!
January, 2021
February, 2024
BIOSAMPLE
TYPE
920 results
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Clear Filters
accessible chromatin
variant allelic effects
primary cell
monocyte
17
fibroblast
16
endothelial cell
13
excitatory neuron
12
macrophage
11
+ See 208 more…
tissue
retina
23
1
pigmented layer of retina
19
kidney
10
1
heart
5
2
islet of Langerhans
6
1
+ See 90 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 149 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 32 more…
See all biosamples
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