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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1155
target gene predictions
977
histone modifications
939
chromatin state
836
accessible chromatin
811
binding sites
609
gene expression
164
eQTL
162
differential activity
84
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
February, 2024
44
November, 2022
30
August, 2021
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
832
bed bed3+
474
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
791
Homo sapiens
Biosample type
425
primary cell
184
tissue
163
cell line
64
in vitro differentiated cells
Organ
176
epithelium
81
connective tissue
58
eye
50
kidney
42
brain
40
pancreas
32
vasculature
26
heart
22
blood vessel
22
musculature of body
21
intestine
20
limb
15
liver
15
lung
14
bone element
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
bone marrow
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
595
AMP
222
ENCODE
19
LungMap
Genome assembly (visualization)
832
hg19
370
GRCh38
month_released!
January, 2021
February, 2024
BIOSAMPLE
TYPE
836 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
fibroblast
16
endothelial cell
13
excitatory neuron
12
macrophage
11
+ See 204 more…
tissue
retina
23
pigmented layer of retina
19
kidney
10
islet of Langerhans
6
heart
5
+ See 85 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 28 more…
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