Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1183
target gene predictions
977
histone modifications
939
chromatin state
811
binding sites
609
gene expression
575
accessible chromatin
162
differential activity
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
572
bed bed3+
502
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
530
Homo sapiens
Biosample type
400
primary cell
121
tissue
43
in vitro differentiated cells
11
cell line
Organ
161
epithelium
62
connective tissue
52
eye
46
pancreas
35
kidney
26
vasculature
21
brain
21
heart
18
blood vessel
16
musculature of body
14
limb
11
intestine
10
bone element
10
liver
9
lung
8
artery
8
skeleton
6
adipose tissue
6
adrenal gland
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
3
ureter
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
nerve
2
placenta
2
small intestine
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
306
AMP
222
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
572
hg19
370
GRCh38
month_released!
June, 2020
February, 2024
BIOSAMPLE
TYPE
575 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
fibroblast
16
monocyte
16
endothelial cell
14
excitatory neuron
12
macrophage
12
+ See 180 more…
tissue
retina
22
pigmented layer of retina
19
kidney
9
islet of Langerhans
5
coronary artery
3
+ See 49 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 9 more…
cell line
EndoC_BH1
8
HepG2
1
glomerular visceral epithelial cell
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download