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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
910
chromatin state
899
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
105
January, 2022
65
January, 2020
57
August, 2021
56
February, 2024
54
May, 2020
44
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
25
February, 2023
19
April, 2020
14
February, 2021
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2023
Available data
899
bed bed3+
521
bigWig
27
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1024
Homo sapiens
Biosample type
517
primary cell
311
tissue
173
cell line
69
in vitro differentiated cells
Organ
213
epithelium
106
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
32
blood vessel
32
heart
31
liver
31
musculature of body
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
795
AMP
222
ENCODE
29
T1D
19
LungMap
3
ITG
2
community
Genome assembly (visualization)
954
hg19
512
GRCh38
3
hg18
month_released!
May, 2022
BIOSAMPLE
TYPE
1070 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
11
7
fibroblast
14
2
endothelial cell
13
1
excitatory neuron
12
+ See 226 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
3
7
+ See 128 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 150 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
See all biosamples
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