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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1356
target gene predictions
977
histone modifications
904
chromatin state
817
binding sites
790
accessible chromatin
666
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
January, 2020
54
May, 2020
49
February, 2024
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
783
bed bed3+
445
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
745
Homo sapiens
Biosample type
441
primary cell
162
cell line
139
tissue
48
in vitro differentiated cells
Organ
183
epithelium
69
connective tissue
63
pancreas
36
kidney
35
eye
26
vasculature
24
brain
21
blood vessel
21
intestine
21
liver
19
musculature of body
17
heart
15
bone element
15
lung
14
limb
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
3
adipose tissue
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
ureter
1
urinary bladder
Project
520
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
785
hg19
324
GRCh38
month_released!
May, 2022
January, 2020
November, 2022
BIOSAMPLE
TYPE
790 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
14
endothelial cell
13
excitatory neuron
12
macrophage
11
+ See 203 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
tissue
retina
15
pigmented layer of retina
11
kidney
8
islet of Langerhans
6
heart
3
+ See 81 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
5
adipocyte
3
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
+ See 24 more…
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