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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
243
candidate regulatory elements
236
accessible chromatin
188
target gene predictions
121
chromatin state
94
differential activity
50
variant allelic effects
47
binding sites
33
histone modifications
5
eQTL
2
caQTL
Date released
79
November, 2021
33
June, 2020
26
February, 2024
18
January, 2020
16
August, 2021
15
November, 2022
10
February, 2023
10
January, 2021
7
April, 2020
7
May, 2021
5
October, 2019
5
September, 2022
4
May, 2020
May, 2022
1
November, 2019
Available data
233
bed bed3+
177
bigWig
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
236
Homo sapiens
Biosample type
159
primary cell
51
tissue
16
cell line
10
in vitro differentiated cells
Organ
210
epithelium
85
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
26
blood vessel
26
heart
24
musculature of body
23
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
140
AMP
79
ENCODE
10
T1D
7
LungMap
Genome assembly (visualization)
235
hg19
131
GRCh38
month_released!
May, 2022
BIOSAMPLE
TYPE
236 results
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Clear Filters
accessible chromatin
primary cell
endothelial cell
13
hepatocyte
8
pancreatic beta cell
8
pancreatic alpha cell
7
endothelial cell of hepatic sinusoid
6
+ See 74 more…
tissue
pigmented layer of retina
20
kidney
10
pancreatic ductal cell
2
renal pelvis
2
breast epithelium
1
+ See 16 more…
cell line
EndoC_BH1
8
ACHN
1
Caki2
1
HEK293
1
RCC 7860
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
foreskin keratinocyte
1
mammary gland epithelial cell
1
renal cell carcinoma
1
See all biosamples
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