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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1339
target gene predictions
977
histone modifications
940
chromatin state
847
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
167
differential activity
74
Fine-mapped variants
61
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
1
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
837
bed bed3+
463
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
847
Homo sapiens
Biosample type
437
primary cell
181
tissue
162
cell line
67
in vitro differentiated cells
Organ
210
epithelium
88
connective tissue
61
pancreas
59
eye
47
kidney
40
brain
32
vasculature
27
musculature of body
23
heart
23
liver
22
blood vessel
21
intestine
18
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
testis
2
thymus
2
thyroid gland
1
breast
1
mouth
1
nose
1
spleen
1
tongue
1
trachea
1
urinary bladder
1
vein
Project
577
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
839
hg19
372
GRCh38
month_released!
November, 2019
May, 2020
BIOSAMPLE
TYPE
847 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
16
monocyte
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 203 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
pancreas
5
heart
4
+ See 91 more…
cell line
EndoC_BH1
7
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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