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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
869
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
732
February, 2021
289
June, 2020
222
November, 2021
105
January, 2022
91
October, 2022
65
January, 2020
62
February, 2024
58
August, 2021
54
May, 2020
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2020
1
March, 2023
Available data
1689
bed bed3+
517
bigWig
27
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1811
Homo sapiens
Biosample type
816
cell line
621
primary cell
331
tissue
89
in vitro differentiated cells
Organ
243
epithelium
133
connective tissue
87
brain
85
pancreas
63
vasculature
61
kidney
60
bodily fluid
59
blood
48
blood vessel
45
liver
44
eye
41
musculature of body
37
heart
34
skin of body
30
intestine
27
limb
25
embryo
25
lung
23
bone element
22
artery
21
adipose tissue
20
lymph node
19
mammary gland
18
large intestine
14
prostate gland
13
extraembryonic component
11
gonad
10
penis
9
stomach
8
adrenal gland
8
placenta
8
skeleton
8
uterus
7
esophagus
7
testis
6
lymphatic vessel
6
spinal cord
5
bronchus
5
nerve
5
vein
4
bone marrow
4
small intestine
4
spleen
4
ureter
3
ovary
3
thymus
3
thyroid gland
3
trachea
2
breast
2
lymphoid tissue
2
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
1
vagina
Project
1582
AMP
222
ENCODE
29
T1D
19
LungMap
3
ITG
2
community
Genome assembly (visualization)
1743
hg19
524
GRCh38
4
hg18
month_released!
November, 2022
BIOSAMPLE
TYPE
1857 results
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Clear Filters
accessible chromatin
binding sites
eQTL
cell line
EndoC_BH1
8
1
breast cancer cell
9
lymphoblastoid cell line
1
2
6
fibroblast cell line
1
6
melanoma
7
+ See 542 more…
primary cell
monocyte
18
1
4
fibroblast
16
1
2
macrophage
12
7
endothelial cell
15
2
1
endothelial cell of hepatic sinusoid
6
6
+ See 253 more…
tissue
islet of Langerhans
6
2
13
retina
16
1
1
kidney
10
1
1
liver
4
1
7
pigmented layer of retina
11
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
5
1
adipocyte
3
1
T-cell acute lymphoblastic leukemia
3
adipose-derived stem cell
2
1
+ See 47 more…
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