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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
844
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
166
differential activity
139
variant allelic effects
74
Fine-mapped variants
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
105
January, 2022
65
January, 2020
57
August, 2021
56
February, 2024
54
May, 2020
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2023
Available data
847
bed bed3+
498
bigWig
27
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
969
Homo sapiens
Biosample type
521
primary cell
270
tissue
173
cell line
51
in vitro differentiated cells
Organ
190
epithelium
102
connective tissue
80
pancreas
71
brain
54
kidney
41
vasculature
34
musculature of body
32
liver
31
blood vessel
31
heart
25
limb
24
intestine
19
adipose tissue
16
lung
16
skin of body
15
artery
15
bone element
14
blood
14
bodily fluid
14
eye
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
740
AMP
222
ENCODE
29
T1D
19
LungMap
3
ITG
2
community
Genome assembly (visualization)
902
hg19
517
GRCh38
3
hg18
month_released!
November, 2022
February, 2023
BIOSAMPLE
TYPE
1015 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
12
7
fibroblast
16
2
endothelial cell
15
1
excitatory neuron
12
+ See 224 more…
tissue
islet of Langerhans
6
13
kidney
10
1
liver
4
7
subcutaneous adipose tissue
2
6
pancreas
5
1
+ See 128 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 150 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
5
adipocyte
3
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
+ See 26 more…
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