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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
960
histone modifications
944
chromatin state
839
accessible chromatin
816
binding sites
634
gene expression
167
differential activity
144
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
November, 2022
August, 2021
30
February, 2023
28
January, 2021
26
May, 2021
19
April, 2020
15
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
7
October, 2022
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
845
bed bed3+
497
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
807
Homo sapiens
Biosample type
473
primary cell
175
tissue
163
cell line
41
in vitro differentiated cells
Organ
191
epithelium
83
connective tissue
65
pancreas
42
brain
39
vasculature
37
eye
35
kidney
29
blood vessel
29
musculature of body
28
heart
25
liver
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
adipose tissue
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
580
AMP
222
ENCODE
31
T1D
19
LungMap
Genome assembly (visualization)
840
hg19
382
GRCh38
month_released!
November, 2022
August, 2021
BIOSAMPLE
TYPE
852 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
18
endothelial cell
14
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 206 more…
tissue
retina
16
pigmented layer of retina
11
islet of Langerhans
6
heart
5
liver
4
1
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
embryonic stem cell
5
adipocyte
3
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SGBS preadipocytes
2
+ See 25 more…
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