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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
960
histone modifications
944
chromatin state
839
accessible chromatin
816
binding sites
634
gene expression
167
differential activity
144
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
851
February, 2021
289
June, 2020
222
November, 2021
140
May, 2021
65
January, 2020
54
May, 2020
49
February, 2024
August, 2021
November, 2022
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1792
bed bed3+
497
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1754
Homo sapiens
Biosample type
747
cell line
669
primary cell
262
tissue
121
in vitro differentiated cells
Organ
214
epithelium
106
connective tissue
90
brain
71
pancreas
44
vasculature
41
eye
41
kidney
37
bodily fluid
36
blood
35
liver
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
penis
8
skeleton
7
adipose tissue
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1529
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1794
hg19
464
GRCh38
month_released!
November, 2022
August, 2021
BIOSAMPLE
TYPE
1799 results
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Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 518 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
fibroblast
16
endothelial cell
1
14
excitatory neuron
12
+ See 247 more…
tissue
retina
1
16
pigmented layer of retina
11
islet of Langerhans
1
6
heart
1
5
liver
2
4
+ See 153 more…
in vitro differentiated cells
embryonic stem cell
1
5
neuroblastoma cell line
6
T-cell acute lymphoblastic leukemia
5
B cell
2
2
adipocyte
1
3
+ See 71 more…
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