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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
960
histone modifications
939
chromatin state
874
accessible chromatin
816
binding sites
634
gene expression
167
differential activity
142
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
864
bed bed3+
499
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
829
Homo sapiens
Biosample type
466
primary cell
188
tissue
163
cell line
57
in vitro differentiated cells
Organ
199
epithelium
87
connective tissue
59
eye
59
pancreas
42
brain
36
vasculature
35
kidney
27
musculature of body
26
blood vessel
25
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
604
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
866
hg19
367
GRCh38
month_released!
October, 2019
August, 2021
BIOSAMPLE
TYPE
874 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
12
+ See 206 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
liver
4
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
3
+ See 28 more…
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