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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1628
candidate regulatory elements
1302
target gene predictions
953
histone modifications
919
chromatin state
901
accessible chromatin
772
binding sites
682
gene expression
167
differential activity
167
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
277
June, 2020
222
November, 2021
105
January, 2022
65
January, 2020
56
February, 2024
55
August, 2021
54
May, 2020
44
November, 2022
29
May, 2021
28
January, 2021
26
February, 2020
25
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2023
Available data
901
bed bed3+
528
bigWig
25
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1022
Homo sapiens
Biosample type
527
primary cell
310
tissue
162
cell line
69
in vitro differentiated cells
Organ
215
epithelium
107
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
795
AMP
222
ENCODE
29
T1D
19
LungMap
3
ITG
Genome assembly (visualization)
954
hg19
518
GRCh38
3
hg18
organ_slims!
blood
BIOSAMPLE
TYPE
1068 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
12
7
fibroblast
16
2
endothelial cell
15
1
excitatory neuron
12
+ See 224 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
4
7
+ See 127 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 139 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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