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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1535
candidate regulatory elements
1265
target gene predictions
923
histone modifications
857
chromatin state
856
accessible chromatin
793
binding sites
660
gene expression
167
differential activity
140
eQTL
123
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
263
June, 2020
221
November, 2021
52
May, 2020
49
February, 2024
47
January, 2020
44
November, 2022
30
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
February, 2021
3
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
846
bed bed3+
497
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
811
Homo sapiens
Biosample type
473
primary cell
166
tissue
149
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
588
AMP
221
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
848
hg19
362
GRCh38
organ_slims!
bone element
brain
BIOSAMPLE
TYPE
856 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 209 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 73 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 134 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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