Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
971
histone modifications
867
chromatin state
863
accessible chromatin
810
binding sites
481
gene expression
165
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
274
June, 2020
219
November, 2021
72
March, 2020
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
15
August, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
June, 2021
Available data
854
bed bed3+
493
bigWig
72
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
892
Homo sapiens
Biosample type
461
primary cell
250
tissue
158
cell line
68
in vitro differentiated cells
Organ
212
epithelium
94
connective tissue
78
brain
70
pancreas
59
eye
kidney
45
vasculature
35
blood vessel
35
heart
33
musculature of body
29
limb
27
liver
21
intestine
17
artery
15
bone element
15
lung
13
adipose tissue
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
nerve
5
gonad
5
prostate gland
5
spinal cord
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
670
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
928
hg19
437
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
937 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
Fine-mapped variants
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 199 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
2
coronary artery
3
3
right atrium auricular region
3
3
+ See 96 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
See all biosamples
Download