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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
971
histone modifications
867
chromatin state
863
accessible chromatin
810
binding sites
481
gene expression
167
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
845
February, 2021
274
June, 2020
219
November, 2021
140
May, 2021
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
32
August, 2021
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1824
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1789
Homo sapiens
Biosample type
740
cell line
671
primary cell
261
tissue
162
in vitro differentiated cells
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1567
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1826
hg19
470
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
1834 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 512 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
fibroblast
16
excitatory neuron
12
+ See 242 more…
tissue
retina
1
23
pigmented layer of retina
20
islet of Langerhans
1
6
heart
1
5
liver
2
4
+ See 141 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 74 more…
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