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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1478
candidate regulatory elements
1242
target gene predictions
966
histone modifications
863
accessible chromatin
827
chromatin state
807
binding sites
657
gene expression
167
differential activity
159
eQTL
122
variant allelic effects
56
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
276
June, 2020
214
November, 2021
54
May, 2020
50
January, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
19
April, 2020
14
May, 2022
8
October, 2019
7
November, 2019
6
September, 2022
4
February, 2021
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
853
bed bed3+
491
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
818
Homo sapiens
Biosample type
475
primary cell
160
tissue
159
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
heart
24
liver
21
intestine
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
601
AMP
214
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
855
hg19
355
GRCh38
organ_slims!
limb
heart
placenta
BIOSAMPLE
TYPE
863 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 210 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
pancreas
5
+ See 73 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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