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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1589
candidate regulatory elements
1300
target gene predictions
958
histone modifications
894
chromatin state
880
accessible chromatin
801
binding sites
659
gene expression
163
differential activity
160
eQTL
136
variant allelic effects
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
215
November, 2021
63
January, 2020
54
May, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
13
May, 2022
11
November, 2019
10
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
870
bed bed3+
511
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
835
Homo sapiens
Biosample type
461
primary cell
190
tissue
160
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
617
AMP
215
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
872
hg19
371
GRCh38
organ_slims!
liver
extraembryonic component
BIOSAMPLE
TYPE
880 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 208 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 146 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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