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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1565
candidate regulatory elements
1261
target gene predictions
948
histone modifications
882
chromatin state
819
accessible chromatin
776
binding sites
634
gene expression
153
differential activity
150
eQTL
123
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
266
June, 2020
187
November, 2021
56
January, 2020
54
May, 2020
43
February, 2024
37
November, 2022
30
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
16
April, 2020
12
November, 2019
11
May, 2022
10
February, 2021
8
October, 2019
6
September, 2022
4
January, 2022
1
September, 2018
Available data
809
bed bed3+
470
bigWig
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
774
Homo sapiens
Biosample type
418
primary cell
189
tissue
156
cell line
56
in vitro differentiated cells
Organ
212
epithelium
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
588
AMP
187
ENCODE
28
T1D
16
LungMap
Genome assembly (visualization)
811
hg19
341
GRCh38
organ_slims!
mammary gland
connective tissue
BIOSAMPLE
TYPE
819 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
endothelial cell
15
excitatory neuron
12
macrophage
12
smooth muscle cell
9
+ See 191 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 142 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
4
B cell
2
+ See 25 more…
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