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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1565
candidate regulatory elements
1261
target gene predictions
948
histone modifications
882
chromatin state
819
accessible chromatin
776
binding sites
634
gene expression
153
differential activity
150
eQTL
123
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
700
February, 2021
266
June, 2020
187
November, 2021
78
October, 2022
56
January, 2020
54
May, 2020
49
February, 2024
37
November, 2022
31
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
16
April, 2020
12
November, 2019
11
May, 2022
8
October, 2019
6
September, 2022
4
January, 2022
1
March, 2020
1
September, 2018
Available data
1585
bed bed3+
470
bigWig
8
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1550
Homo sapiens
Biosample type
790
cell line
492
primary cell
223
tissue
90
in vitro differentiated cells
Organ
255
epithelium
connective tissue
70
pancreas
65
eye
58
bodily fluid
58
brain
57
blood
57
kidney
57
vasculature
42
blood vessel
37
liver
34
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
mammary gland
17
artery
16
large intestine
13
prostate gland
12
extraembryonic component
10
penis
9
adipose tissue
8
gonad
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
6
lymphatic vessel
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1364
AMP
187
ENCODE
28
T1D
16
LungMap
Genome assembly (visualization)
1586
hg19
347
GRCh38
1
hg18
organ_slims!
mammary gland
connective tissue
BIOSAMPLE
TYPE
1595 results
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Clear Filters
accessible chromatin
binding sites
cell line
EndoC_BH1
8
1
breast cancer cell
9
fibroblast cell line
1
6
melanoma
7
HepG2
2
3
+ See 531 more…
primary cell
monocyte
18
1
endothelial cell
15
2
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
macrophage
12
+ See 216 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
islet of Langerhans
6
2
heart
5
1
+ See 106 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
retinal pigment epithelial cell
6
SGBS preadipocytes
4
T-cell acute lymphoblastic leukemia
3
+ See 45 more…
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