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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1640
candidate regulatory elements
1338
target gene predictions
971
histone modifications
925
chromatin state
895
accessible chromatin
809
binding sites
677
gene expression
167
differential activity
167
eQTL
138
variant allelic effects
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
221
November, 2021
64
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
11
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
February, 2021
3
September, 2018
2
November, 2020
1
June, 2021
Available data
885
bed bed3+
516
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
850
Homo sapiens
Biosample type
482
primary cell
186
tissue
158
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
627
AMP
221
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
887
hg19
381
GRCh38
organ_slims!
nerve
bone element
BIOSAMPLE
TYPE
895 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 216 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 86 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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