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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1656
candidate regulatory elements
1349
target gene predictions
977
histone modifications
938
chromatin state
911
accessible chromatin
816
binding sites
682
gene expression
168
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
851
February, 2021
288
June, 2020
222
November, 2021
140
May, 2021
65
January, 2020
54
May, 2020
49
February, 2024
47
August, 2021
44
November, 2022
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
September, 2022
11
November, 2019
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1877
bed bed3+
527
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1843
Homo sapiens
Biosample type
747
cell line
694
primary cell
284
tissue
163
in vitro differentiated cells
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1618
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1879
hg19
496
GRCh38
organ_slims!
spleen
BIOSAMPLE
TYPE
1888 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 518 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
fibroblast
16
excitatory neuron
12
+ See 260 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
heart
1
5
+ See 152 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 75 more…
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