Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
190
candidate regulatory elements
154
target gene predictions
125
accessible chromatin
120
chromatin state
73
histone modifications
68
gene expression
48
eQTL
46
binding sites
42
Fine-mapped variants
30
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
40
June, 2020
32
November, 2021
23
January, 2020
7
November, 2022
6
February, 2024
3
April, 2020
3
May, 2022
2
May, 2020
2
November, 2020
2
September, 2018
1
February, 2021
1
January, 2021
1
January, 2022
1
June, 2021
1
October, 2019
Available data
125
bed bed3+
72
bigWig
1
bigBed narrowPeak
Organism
125
Homo sapiens
Biosample type
67
primary cell
31
tissue
14
cell line
13
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
89
AMP
32
ENCODE
3
LungMap
1
T1D
Genome assembly (visualization)
125
hg19
65
GRCh38
BIOSAMPLE
TYPE
125 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
fibroblast
16
pericyte cell
10
osteoblast
5
cardiac fibroblast
3
hepatic stellate cell
3
+ See 23 more…
tissue
Ammon's horn
2
adipose tissue
2
brain
2
caudate nucleus
2
frontal cortex
2
+ See 13 more…
cell line
fibroblast of cardiac tissue
2
A172
1
BE(2)-C
1
Daoy
1
GM23248
1
+ See 8 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
4
SGBS preadipocytes
1
hippocampal neuron
1
mesenchymal stem cell
1
+ See 1 more…
See all biosamples
Download