Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
202
gene expression
159
candidate regulatory elements
77
chromatin state
75
target gene predictions
56
differential activity
50
accessible chromatin
16
variant allelic effects
7
binding sites
6
histone modifications
4
eQTL
Date released
84
February, 2021
75
September, 2022
15
August, 2021
15
June, 2020
14
January, 2020
3
May, 2020
3
November, 2021
Available data
208
bed bed3+
35
bigWig
Organism
209
Homo sapiens
Biosample type
150
tissue
39
primary cell
19
cell line
1
in vitro differentiated cells
Organ
312
epithelium
209
kidney
173
musculature of body
168
connective tissue
153
brain
146
lung
134
intestine
114
limb
96
heart
89
pancreas
88
skin of body
86
vasculature
79
large intestine
77
eye
69
embryo
68
extraembryonic component
65
blood vessel
59
bodily fluid
59
stomach
55
blood
47
liver
40
bone element
40
small intestine
35
adrenal gland
35
mammary gland
35
ureter
33
placenta
32
prostate gland
31
penis
29
lymph node
26
adipose tissue
22
gonad
22
thymus
21
artery
21
esophagus
18
spinal cord
17
spleen
12
skeleton
12
uterus
11
lymphoid tissue
11
testis
10
ovary
10
thyroid gland
9
mouth
9
nerve
8
lymphatic vessel
8
vein
7
bronchus
6
breast
5
tongue
4
bone marrow
4
urinary bladder
4
vagina
2
nose
1
trachea
Project
206
AMP
3
ENCODE
Genome assembly (visualization)
208
hg19
27
GRCh38
BIOSAMPLE
TYPE
209 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
tissue
kidney
29
10
renal cortex interstitium
20
1
renal pelvis
19
2
right kidney
20
1
left kidney
18
+ See 7 more…
primary cell
kidney tubule cell
3
2
glomerular endothelial cell
2
2
glomerular visceral epithelial cell
2
2
kidney glomerular epithelial cell
2
2
renal cortical epithelial cell
2
2
+ See 13 more…
cell line
HEK293
3
1
ACHN
2
1
Caki2
2
1
RCC 7860
2
1
G401
2
+ See 4 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
Download