Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
54
target gene predictions
42
chromatin state
18
binding sites
17
accessible chromatin
13
histone modifications
6
eQTL
4
gene expression
3
variant allelic effects
Date released
41
September, 2022
10
June, 2020
7
November, 2021
1
August, 2017
Available data
41
bed bed9
18
bed bed3+
7
bigWig
Organism
59
Homo sapiens
Biosample type
28
primary cell
16
cell line
11
tissue
4
in vitro differentiated cells
Organ
265
epithelium
136
connective tissue
127
kidney
114
brain
101
musculature of body
86
lung
82
pancreas
80
intestine
77
heart
70
limb
69
vasculature
68
eye
54
blood vessel
48
skin of body
46
large intestine
42
extraembryonic component
41
liver
40
embryo
39
bodily fluid
37
blood
32
stomach
30
bone element
23
small intestine
22
mammary gland
21
adrenal gland
20
placenta
19
artery
18
prostate gland
17
adipose tissue
17
ureter
16
lymph node
13
gonad
13
penis
13
thymus
11
esophagus
11
skeleton
10
spinal cord
8
spleen
7
lymphoid tissue
7
nerve
7
uterus
7
vein
6
lymphatic vessel
6
ovary
6
testis
6
thyroid gland
5
bronchus
5
mouth
4
bone marrow
3
breast
3
tongue
3
urinary bladder
2
nose
2
vagina
1
trachea
Project
52
AMP
7
ENCODE
Genome assembly (visualization)
59
hg19
48
GRCh38
BIOSAMPLE
TYPE
59 results
search-icon
table-tab-icon
Clear Filters
chromatin state
accessible chromatin
primary cell
keratinocyte
3
2
foreskin keratinocyte
4
skin fibroblast
2
2
fibroblast of dermis
3
dermis blood vessel endothelial cell
2
+ See 7 more…
cell line
GM23248
1
1
RPMI7951
1
1
COLO829
1
SK-MEL-5
1
foreskin fibroblast
1
+ See 9 more…
tissue
esophagus muscularis mucosa
2
1
esophagus squamous epithelium
2
1
esophagus
2
lower leg skin
2
skin of body
1
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
foreskin keratinocyte
1
iPS DF 4.7 Cell Line
1
skin fibroblast
1
See all biosamples
Download